PathPilot requires you reference all axes before it will do anything else. So it wants to hit a limit switch on each axis so it knows where the table and head are.
Even the Y axis, which is not used in RapidTurn mode, must be referenced. Tormach leave the Y axis usable for checking the lathe head is perpendicular to the Z axis and centring the lathe head in that direction. Once you've done that, you leave it alone until next time you install the lathe head.
With the aid of a torch I had a look under the front splash guard on the table and found the limit switch is in the middle of the bed casting, with lugs at either end of the table. I had about another 10mm to go before the right lug tripped the switch, which exposed about 10mm of the dovetails and had the table a LONG way over to the left.
But it's finally happy so now I can go onto trying to remember how to set up the toolpost!